GUIDE
The MSP guide to Microsoft 365 security at scale
How MSPs can unify cybersecurity management
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How MSPs can unify cybersecurity management
But MSPs are hitting their own limits. Managing security across a growing customer base often means juggling five or more agents per user: EDR, identity security, RMM, device management, email protection, attack surface management... the list is endless.
The operational overhead is significant, yet many MSPs hesitate to consolidate due to concerns about vendor lock-in, security gaps, limited MSP-specific coverage, or unpredictable pricing.
At the same time, Microsoft has rapidly matured its security stack, matching—and in some areas, surpassing—third-party tools across endpoints, identity, cloud workloads, and data. What’s been missing is true multi-tenant management and MSP-friendly economics to make standardizing on Microsoft security viable at scale.
This guide walks through how to consolidate on Microsoft 365 Business Premium without compromising security or margins. You’ll reduce endpoint agent sprawl, simplify security management, boost technician productivity, and eliminate unnecessary vendor costs, driving real operational efficiency and profitability with confidence.
Any growing MSP has experienced the following scenario: You start with foundational security, like a next-generation antivirus (NGAV) or an EDR platform, and start offering more security as customers, cyber insurance providers, or compliance auditors begin requiring it. Years later, you’re juggling multiple security tools, launching five different agents to diagnose and troubleshoot basic security issues, and dealing with sluggish environments as a result.
Before long, you’re juggling dozens of logins, and your technicians are only relying on the security solutions they know like a crutch, impacting the effectivity of your security services and investigations.
This tool sprawl is a major operational liability. While the obvious answer to this problem would be for MSPs to centralize security operations on one platform, most best-in-class security solutions did not support multi-tenancy for MSPs. Additionally, most MSPs are wary of potential security and reliability risks that come with consolidating on one platform, regardless of any efficiency benefits. To an MSP, it feels like trading one set of problems for another.
These concerns are valid, and ignoring them is not an option. That’s why MSPs need visibility that proactively addresses potential risks and keeps their security posture hardened.
When Microsoft reintroduced the Defender security portfolio in 2019, market reaction was mixed. At best, it was seen as “good enough.” At worst, it was dismissed as a low-cost, checkbox solution.
That perception has changed. Microsoft has made security a top priority, investing more than $20 billion, employing over 34,000 security engineers, and building a robust partner ecosystem through initiatives like the Microsoft Intelligent Security Association (MISA). Today, Microsoft is a security leader in its own right.
More importantly, Microsoft recognized that the biggest security gaps don’t exist in the Fortune 500; they exist in the other 99% of businesses. In response, it bundled core security capabilities into Microsoft 365 Business Premium, including Defender for Business, Entra ID, and Purview. MSPs can further extend coverage with advanced Defender and Entra plans, cloud app and identity protection, and Purview add-ons—often at up to a 65% per-license discount compared to standalone tools.
Consolidating on Microsoft’s native security stack helps MSPs regain operational control. Fewer tools mean simpler training, higher efficiency, and reduced risk. Instead of managing dozens of portals, teams can operate from a single, standardized environment.
For technicians, consolidation means faster resolution times and fewer errors. Less context switching leads to better outcomes and more time spent solving real problems. Standardization also improves communication by aligning teams around shared tools and processes.

For MSPs that are bought into Microsoft Security, the right Microsoft 365 multi-tenant management platform can offer the secure baselines and policy management MSPs need to address the risks they’re really facing when they consolidate on any vendor, like security blind spots or a lack of consistency across tenants and environments. The right platform offers controlled architecture and centralized policies, enabling you to monitor access, manage permissions, and act quickly when needed.
Consolidating on Microsoft 365 will also enable MSPs to make their pricing clearer and more predictable. You won’t have to reconcile five different invoices from separate security or compliance providers – it’ll all be in your Microsoft invoice.
Flexibility doesn’t vanish with a unified model. Many platforms support integrations or exports so you’re not boxed in. When built for MSPs, core tools are built in from the start, not tacked on through plugins.
How do you know you’re picking the right platform to help your MSP manage Microsoft 365 security at scale? Here are the questions you can ask to move beyond marketing claims and get to the facts that matter.
Scoring vendors across these categories gives you a clearer picture of how they stack up—and whether they’re truly ready to support your business at scale.
At Nerdio, we believe MSPs make the best decisions when they ask tough questions and get honest answers.
We know switching platforms impacts your team, clients, and business model. That’s why Nerdio Manager for MSP is built to meet the real-world needs of MSPs managing Microsoft 365 tenants and software. From centralized control of Microsoft Defender, Intune, and other Business Premium solutions to proactive management of users, devices, security groups, and third-party applications, it’s designed drastically to cut overhead and improve service delivery.
But features aren’t enough. We back our platform with real reliability, including uptime that exceeds industry benchmarks, clear SLAs, transparent incident reporting, and a support team staffed by former MSPs who understand speed, empathy, and expertise matter.
Consolidation shouldn’t mean compromising on security and efficiency. With the right questions, meaningful evaluation criteria, and a plan to validate your choice, you can replace tool sprawl with clarity and confidence.
Ready to get started? Get in touch with a Microsoft 365 specialist at Nerdio to see how you can streamline your MSP business.